Compound ID | 2348

Update compound information

Albomycin δ2

Synonym(s): Albomycin  |  albomycin delta 2  |  grisein  |  SB-217452  |  SB217452  |  SB 217452

Class: Natural product antibiotic

Agent Type: Natural product; Small molecule; Direct acting;
Spectrum of activity: Gram-positive & Gram-negative
Mechanism of action: Protein synthesis inhibitor. Aminoacyl-tRNA synthetase inhibitor (seryl-tRNA synthetase [SerRS] inhibitor)
Target Pathogen: Active against Streptococcus pneumoniae, Staphylococcus aureus, methicillin-resistant Staphylococcus aureus, and Escherichia coli
Description: Natural product from soil isolate Streptomyces griseus
Year first mentioned: 1947
Development status: Experimental
Chemical structure(s):
Click here for structure editor
Molecular weight: 1048.85
Iso. SMILES: CC(=O)N(CCC[C@@H](C(=O)N[C@@H](CCCN(C(=O)C)O)C(=O)N[C@@H](CCCN(C(=O)C)O)C(=O)N[C@@H](CO)C(=O)N[C@H]([C@@H]([C@@H]1[C@@H]([C@H]([C@@H](S1)N2C=C/C(=N\C(=O)N)/N(C2=O)C)O)O)O)C(=O)O)N)O.[Fe]
InChI Key: XEGJEKIQLBLKHJ-IDJYBIRTSA-N
Can. SMILES: CC(=O)N(CCC[C@@H](C(=O)N[C@@H](CCCN(C(=O)C)O)C(=O)N[C@@H](CCCN(C(=O)C)O)C(=O)N[C@@H](CO)C(=O)N[C@H]([C@@H]([C@@H]1[C@@H]([C@H]([C@H](N2C=C/C(=N\C(=O)N)/N(C)C2=O)S1)O)O)O)C(=O)O)N)O.[Fe]
InChI: InChI=1S/C37H60N12O18S.Fe/c1-17(51)47(65)12-5-8-20(38)30(57)40-21(9-6-13-48(66)18(2)52)31(58)41-22(10-7-14-49(67)19(3)53)32(59)42-23(16-50)33(60)44-25(35(61)62)26(54)29-27(55)28(56)34(68-29)46-15-11-24(43-36(39)63)45(4)37(46)64;/h11,15,20-23,25-29,34,50,54-56,65-67H,5-10,12-14,16,38H2,1-4H3,(H2,39,63)(H,40,57)(H,41,58)(H,42,59)(H,44,60)(H,61,62);/b43-24+;/t20-,21-,22-,23-,25+,26-,27+,28+,29+,34+;/m0./s1
External links:
PubChem link: https://pubchem.ncbi.nlm.nih.gov/compound/86290052
Citations:
  • https://www.jstage.jst.go.jp/article/antibiotics1968/53/12/53_12_1346/_article
  • https://www.nature.com/articles/s41467-018-05821-1#Sec2

    • AntibioticDB is supported by GARDP.

    If you have feedback, experience problems, or are interested in a collaboration, please contact us. | Terms and conditions

    The content of this site is intended for educational and scientific research purposes only and not as a source of medical advice or consultation.